Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 AC232323.1-201ENST00000540724 2099 ntBASIC14.56□□□□□ -0.08
CLN6Q9NWW5 REXO1L5P-201ENST00000622260 2098 ntBASIC14.56□□□□□ -0.08
CLN6Q9NWW5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 PMS2P4-201ENST00000412466 1052 ntBASIC14.56□□□□□ -0.08
CLN6Q9NWW5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 DUSP5P1-201ENST00000441325 1139 ntBASIC14.56□□□□□ -0.08
CLN6Q9NWW5 SAPCD2P3-201ENST00000455031 850 ntBASIC14.56□□□□□ -0.08
CLN6Q9NWW5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 AP002469.2-201ENST00000531724 424 ntBASIC14.56□□□□□ -0.08
CLN6Q9NWW5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 MIR4515-201ENST00000584082 81 ntBASIC14.56□□□□□ -0.08
CLN6Q9NWW5 AL031055.1-201ENST00000606362 631 ntBASIC14.56□□□□□ -0.08
CLN6Q9NWW5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLN6Q9NWW5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 AL390755.1-201ENST00000623716 2027 ntBASIC14.55□□□□□ -0.08
CLN6Q9NWW5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 MIR3909-201ENST00000579518 119 ntBASIC14.55□□□□□ -0.08
CLN6Q9NWW5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 LINC00528-201ENST00000600723 2160 ntBASIC14.55□□□□□ -0.08
CLN6Q9NWW5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
CLN6Q9NWW5 WASH6P-202ENST00000359512 1437 ntBASIC14.55□□□□□ -0.08
CLN6Q9NWW5 AC126365.1-201ENST00000578585 1514 ntBASIC14.55□□□□□ -0.08
CLN6Q9NWW5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms