Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC52A1Q9NWF4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
SLC52A1Q9NWF4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC52A1Q9NWF4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC52A1Q9NWF4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC52A1Q9NWF4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SLC52A1Q9NWF4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC52A1Q9NWF4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC52A1Q9NWF4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC52A1Q9NWF4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 HNRNPA1P63-201ENST00000427917 963 ntBASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 FAM8A4P-201ENST00000435433 1213 ntBASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SLC52A1Q9NWF4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 SERPINA13P-202ENST00000478994 924 ntBASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 AC007663.3-201ENST00000609632 465 ntBASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 LRRC59-203ENST00000576448 1531 ntBASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC22.3■■□□□ 1.16
SLC52A1Q9NWF4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 AC007787.1-201ENST00000588095 1583 ntBASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 NKAIN1P1-201ENST00000435754 582 ntBASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 COX5BP1-201ENST00000507622 393 ntBASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 RN7SL713P-201ENST00000582127 302 ntBASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 AC138649.2-201ENST00000615886 705 ntBASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC52A1Q9NWF4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms