Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 AC138951.2-201ENST00000623455 1161 ntBASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT13Q9NUP7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRMT13Q9NUP7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRMT13Q9NUP7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRMT13Q9NUP7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
TRMT13Q9NUP7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRMT13Q9NUP7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRMT13Q9NUP7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 AC006001.1-201ENST00000325130 474 ntBASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 AC004945.1-201ENST00000416738 983 ntBASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 MIR4741-201ENST00000579822 90 ntBASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRMT13Q9NUP7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 AC104306.2-201ENST00000451877 341 ntBASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 AL022328.3-201ENST00000607943 679 ntBASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 AC145423.3-201ENST00000615987 467 ntBASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT13Q9NUP7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRMT13Q9NUP7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TRMT13Q9NUP7 AC011676.5-201ENST00000624864 2660 ntBASIC17.24■□□□□ 0.35
TRMT13Q9NUP7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRMT13Q9NUP7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRMT13Q9NUP7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms