Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NXF3Q9H4D5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.04■□□□□ 0.32
NXF3Q9H4D5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 AC000095.1-201ENST00000603208 874 ntBASIC17.04■□□□□ 0.32
NXF3Q9H4D5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 KRT8P22-201ENST00000562317 1415 ntBASIC17.04■□□□□ 0.32
NXF3Q9H4D5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NXF3Q9H4D5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 AL162726.2-201ENST00000438986 1017 ntBASIC17.03■□□□□ 0.32
NXF3Q9H4D5 ACA64.2-201ENST00000459014 129 ntBASIC17.03■□□□□ 0.32
NXF3Q9H4D5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.03■□□□□ 0.32
NXF3Q9H4D5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.03■□□□□ 0.32
NXF3Q9H4D5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NXF3Q9H4D5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms