Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.74□□□□□ -0.05
POLR2J3Q9H1A7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 AC090616.6-203ENST00000579186 1945 ntBASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 AC105250.1-201ENST00000509378 2057 ntBASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
POLR2J3Q9H1A7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 KRT18P2-201ENST00000447938 1258 ntBASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 AC009078.2-202ENST00000463353 338 ntBASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 RNA5SP416-201ENST00000516838 111 ntBASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 FAM86C2P-203ENST00000528684 1004 ntBASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms