Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 AC022145.2-201ENST00000598203 171 ntBASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.98■□□□□ 0.63
UPF3BQ9BZI7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 AC023157.3-201ENST00000619086 2088 ntBASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 LINC02228-204ENST00000642115 2962 ntBASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 AC004987.2-201ENST00000395959 1148 ntBASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 CEND1P1-201ENST00000451006 455 ntBASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 RFPL4AP1-201ENST00000530883 850 ntBASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 AC084121.4-201ENST00000641598 221 ntBASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 AF228730.8-201ENST00000642140 221 ntBASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 AC091951.1-201ENST00000512854 2465 ntBASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPF3BQ9BZI7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 AC105339.1-204ENST00000636249 355 ntBASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.96■□□□□ 0.63
UPF3BQ9BZI7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms