Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RPSAP31-201ENST00000416648 895 ntBASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 FGFR3P1-201ENST00000449999 601 ntBASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 AC132192.2-201ENST00000596206 1147 ntBASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 AC091544.8-201ENST00000619490 361 ntBASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNTNAP3Q9BZ76 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 INTS4P2-202ENST00000614726 2019 ntBASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 NKAIN1P1-201ENST00000435754 582 ntBASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AP001063.1-201ENST00000568332 529 ntBASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AL139327.4-201ENST00000612362 153 ntBASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AP001094.4-201ENST00000579008 2176 ntBASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CNTNAP3Q9BZ76 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CNTNAP3Q9BZ76 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms