Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AC013268.4-201ENST00000637413 2228 ntBASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 TTTY23B-201ENST00000442790 549 ntBASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AC123567.1-201ENST00000548294 1261 ntBASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPAP1Q9BWH6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 AC134407.2-201ENST00000625089 1978 ntBASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 HIST3H2BA-201ENST00000436555 524 ntBASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 MIR6805-201ENST00000615055 62 ntBASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.18■□□□□ 0.66
RPAP1Q9BWH6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPAP1Q9BWH6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms