Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HDHD3Q9BSH5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.46□□□□□ -0.26
HDHD3Q9BSH5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.46□□□□□ -0.26
HDHD3Q9BSH5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.46□□□□□ -0.26
HDHD3Q9BSH5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.46□□□□□ -0.26
HDHD3Q9BSH5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 AC007967.2-201ENST00000432613 625 ntBASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 FAAHP1-202ENST00000446499 1238 ntBASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 KRT18P2-201ENST00000447938 1258 ntBASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 AC064836.3-201ENST00000607928 673 ntBASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 AC007686.3-201ENST00000619017 3487 ntBASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 BNIP3P1-202ENST00000550043 1585 ntBASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HDHD3Q9BSH5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 AL009178.2-201ENST00000597278 2719 ntBASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 AC079776.4-201ENST00000511039 504 ntBASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 MIR4313-201ENST00000580760 101 ntBASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 AC104109.2-201ENST00000602919 1418 ntBASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms