Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CGREF1Q99674 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.14■□□□□ 0.01
CGREF1Q99674 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.14■□□□□ 0.01
CGREF1Q99674 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CGREF1Q99674 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.14■□□□□ 0.01
CGREF1Q99674 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.14■□□□□ 0.01
CGREF1Q99674 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CGREF1Q99674 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 AC005252.3-201ENST00000623855 2258 ntBASIC15.14■□□□□ 0.01
CGREF1Q99674 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.14■□□□□ 0.01
CGREF1Q99674 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CGREF1Q99674 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CGREF1Q99674 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CGREF1Q99674 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.14■□□□□ 0.01
CGREF1Q99674 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
CGREF1Q99674 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CGREF1Q99674 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.13■□□□□ 0.01
CGREF1Q99674 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CGREF1Q99674 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.13■□□□□ 0.01
CGREF1Q99674 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.13■□□□□ 0.01
CGREF1Q99674 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.13■□□□□ 0.01
CGREF1Q99674 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.13■□□□□ 0.01
CGREF1Q99674 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 AC126365.1-201ENST00000578585 1514 ntBASIC15.13■□□□□ 0.01
CGREF1Q99674 AC127383.1-201ENST00000444697 1800 ntBASIC15.13■□□□□ 0.01
CGREF1Q99674 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 CICP23-201ENST00000605013 2741 ntBASIC15.13■□□□□ 0.01
CGREF1Q99674 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CGREF1Q99674 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.13■□□□□ 0.01
CGREF1Q99674 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.13■□□□□ 0.01
CGREF1Q99674 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.13■□□□□ 0.01
CGREF1Q99674 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.13■□□□□ 0.01
CGREF1Q99674 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.13■□□□□ 0.01
CGREF1Q99674 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.13■□□□□ 0.01
CGREF1Q99674 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 AL691432.1-201ENST00000596308 1422 ntBASIC15.13■□□□□ 0.01
CGREF1Q99674 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CGREF1Q99674 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 AGAP7P-201ENST00000582299 2062 ntBASIC15.13■□□□□ 0.01
CGREF1Q99674 AGAP14-201ENST00000624701 2060 ntBASIC15.13■□□□□ 0.01
CGREF1Q99674 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.13■□□□□ 0.01
CGREF1Q99674 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CGREF1Q99674 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CGREF1Q99674 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.13■□□□□ 0.01
CGREF1Q99674 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.12■□□□□ 0.01
CGREF1Q99674 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CGREF1Q99674 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CGREF1Q99674 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CGREF1Q99674 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CGREF1Q99674 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CGREF1Q99674 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CGREF1Q99674 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CGREF1Q99674 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CGREF1Q99674 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.12■□□□□ 0.01
CGREF1Q99674 BNIP3P1-202ENST00000550043 1585 ntBASIC15.12■□□□□ 0.01
CGREF1Q99674 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms