Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 KLF2P2-201ENST00000416807 1039 ntBASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 AL583810.1-201ENST00000553344 1045 ntBASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 HLA-K-203ENST00000430151 1046 ntBASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 AC073413.1-201ENST00000603927 732 ntBASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 AC138951.2-201ENST00000623455 1161 ntBASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CDK5RAP2Q96SN8 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP2Q96SN8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 MTX1P1-201ENST00000440904 838 ntBASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 MIR4525-201ENST00000580000 75 ntBASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 PRSS30P-206ENST00000641773 873 ntBASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AL139094.1-201ENST00000405549 1188 ntBASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP2Q96SN8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms