Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 IDS-203ENST00000428056 1213 ntTSL 2 BASIC25.54■■□□□ 1.68
IFT140Q96RY7 RBM8B-201ENST00000555532 525 ntBASIC25.54■■□□□ 1.68
IFT140Q96RY7 MIR3677-201ENST00000578964 60 ntBASIC25.54■■□□□ 1.68
IFT140Q96RY7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC25.54■■□□□ 1.68
IFT140Q96RY7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC25.54■■□□□ 1.68
IFT140Q96RY7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC25.54■■□□□ 1.68
IFT140Q96RY7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
IFT140Q96RY7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
IFT140Q96RY7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
IFT140Q96RY7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 AL157792.1-201ENST00000488281 530 ntBASIC25.53■■□□□ 1.68
IFT140Q96RY7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 AC100827.2-201ENST00000563214 1194 ntBASIC25.53■■□□□ 1.68
IFT140Q96RY7 AL022344.2-201ENST00000568976 968 ntBASIC25.53■■□□□ 1.68
IFT140Q96RY7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 AC103810.10-201ENST00000606504 343 ntBASIC25.53■■□□□ 1.68
IFT140Q96RY7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 RN7SL258P-201ENST00000478664 300 ntBASIC25.53■■□□□ 1.68
IFT140Q96RY7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
IFT140Q96RY7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
IFT140Q96RY7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC25.52■■□□□ 1.68
IFT140Q96RY7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC25.52■■□□□ 1.68
IFT140Q96RY7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 AL627231.1-201ENST00000394467 1125 ntBASIC25.52■■□□□ 1.68
IFT140Q96RY7 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC25.52■■□□□ 1.68
IFT140Q96RY7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC25.52■■□□□ 1.68
IFT140Q96RY7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC25.52■■□□□ 1.68
IFT140Q96RY7 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
IFT140Q96RY7 AL136301.1-201ENST00000615830 422 ntBASIC25.52■■□□□ 1.68
IFT140Q96RY7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC25.52■■□□□ 1.68
IFT140Q96RY7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
IFT140Q96RY7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC25.52■■□□□ 1.68
IFT140Q96RY7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC25.51■■□□□ 1.68
IFT140Q96RY7 CAP2P1-201ENST00000557743 1390 ntBASIC25.51■■□□□ 1.67
IFT140Q96RY7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
IFT140Q96RY7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC25.51■■□□□ 1.67
IFT140Q96RY7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
IFT140Q96RY7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
IFT140Q96RY7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
IFT140Q96RY7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
IFT140Q96RY7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC25.51■■□□□ 1.67
IFT140Q96RY7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
IFT140Q96RY7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
IFT140Q96RY7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC25.51■■□□□ 1.67
IFT140Q96RY7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC25.51■■□□□ 1.67
IFT140Q96RY7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
IFT140Q96RY7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
IFT140Q96RY7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
IFT140Q96RY7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
IFT140Q96RY7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
IFT140Q96RY7 PIN4P1-201ENST00000451079 396 ntBASIC25.5■■□□□ 1.67
IFT140Q96RY7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 AC130709.1-201ENST00000484779 1212 ntBASIC25.5■■□□□ 1.67
IFT140Q96RY7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 AC007718.1-201ENST00000621078 280 ntBASIC25.5■■□□□ 1.67
IFT140Q96RY7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
IFT140Q96RY7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
IFT140Q96RY7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
IFT140Q96RY7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
IFT140Q96RY7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms