Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC084018.2-201ENST00000613093 2607 ntBASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC85AQ96PX6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 HYMAI-201ENST00000635591 3347 ntBASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 HLA-V-201ENST00000429037 534 ntBASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 AL442647.2-201ENST00000429864 857 ntBASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 SLC25A47P1-201ENST00000531577 414 ntBASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 MIR5189-201ENST00000577370 114 ntBASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 BTNL10-201ENST00000595971 695 ntBASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 AL049840.4-201ENST00000602422 811 ntBASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC85AQ96PX6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 MSTO2P-201ENST00000314835 1709 ntBASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 INTS4P2-202ENST00000614726 2019 ntBASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC85AQ96PX6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms