Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 BCRP6-201ENST00000510112 632 ntBASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 BCRP7-201ENST00000511549 544 ntBASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 AC079328.2-201ENST00000561241 3354 ntBASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 AL359711.2-201ENST00000563105 872 ntBASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 BRI3BPP1-201ENST00000594224 787 ntBASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 PCDHB19P-201ENST00000570871 2371 ntBASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC46A1Q96NT5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AL662844.4-201ENST00000606367 2838 ntBASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AL691432.1-201ENST00000596308 1422 ntBASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AC245100.5-201ENST00000452108 331 ntBASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 FAM86LP-201ENST00000478302 853 ntBASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 PTP4A1P2-201ENST00000546033 454 ntBASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AC103810.3-201ENST00000583567 96 ntBASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC46A1Q96NT5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 HAUS4P1-201ENST00000406739 1145 ntBASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms