Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HPS1Q92902 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
HPS1Q92902 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.67□□□□□ -0.06
HPS1Q92902 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.67□□□□□ -0.06
HPS1Q92902 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 KATNBL1P2-201ENST00000433311 835 ntBASIC14.67□□□□□ -0.06
HPS1Q92902 DNAJB3-201ENST00000446806 729 ntBASIC14.67□□□□□ -0.06
HPS1Q92902 BX005266.1-201ENST00000473402 457 ntBASIC14.67□□□□□ -0.06
HPS1Q92902 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 UNC93B6-202ENST00000528242 690 ntBASIC14.67□□□□□ -0.06
HPS1Q92902 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.67□□□□□ -0.06
HPS1Q92902 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC14.67□□□□□ -0.06
HPS1Q92902 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
HPS1Q92902 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HPS1Q92902 AL589182.2-201ENST00000619332 1049 ntBASIC14.67□□□□□ -0.06
HPS1Q92902 AC005593.1-201ENST00000624894 515 ntBASIC14.67□□□□□ -0.06
HPS1Q92902 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HPS1Q92902 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.67□□□□□ -0.06
HPS1Q92902 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
HPS1Q92902 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HPS1Q92902 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.66□□□□□ -0.06
HPS1Q92902 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HPS1Q92902 NCF1C-201ENST00000438382 1427 ntBASIC14.66□□□□□ -0.06
HPS1Q92902 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HPS1Q92902 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
HPS1Q92902 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 SSR4P1-203ENST00000599569 2260 ntBASIC14.66□□□□□ -0.06
HPS1Q92902 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.66□□□□□ -0.06
HPS1Q92902 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 LINC01101-201ENST00000622953 1884 ntBASIC14.66□□□□□ -0.06
HPS1Q92902 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
HPS1Q92902 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.66□□□□□ -0.06
HPS1Q92902 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.66□□□□□ -0.06
HPS1Q92902 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.66□□□□□ -0.06
HPS1Q92902 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
HPS1Q92902 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.66□□□□□ -0.06
HPS1Q92902 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
HPS1Q92902 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.66□□□□□ -0.06
HPS1Q92902 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.66□□□□□ -0.06
HPS1Q92902 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 AL109954.1-202ENST00000564051 2148 ntBASIC14.66□□□□□ -0.06
HPS1Q92902 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms