Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 SERBP1P3-201ENST00000459980 809 ntBASIC17.04■□□□□ 0.32
SEMA4DQ92854 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SEMA4DQ92854 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.04■□□□□ 0.32
SEMA4DQ92854 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.03■□□□□ 0.32
SEMA4DQ92854 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.03■□□□□ 0.32
SEMA4DQ92854 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 RN7SL618P-201ENST00000477850 296 ntBASIC17.03■□□□□ 0.32
SEMA4DQ92854 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 AC044860.1-202ENST00000559481 777 ntBASIC17.03■□□□□ 0.32
SEMA4DQ92854 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 AC005498.2-205ENST00000593218 784 ntBASIC17.03■□□□□ 0.32
SEMA4DQ92854 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 AF228730.6-201ENST00000641497 218 ntBASIC17.03■□□□□ 0.32
SEMA4DQ92854 AC084121.3-201ENST00000641716 218 ntBASIC17.03■□□□□ 0.32
SEMA4DQ92854 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEMA4DQ92854 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.03■□□□□ 0.32
SEMA4DQ92854 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.02■□□□□ 0.32
SEMA4DQ92854 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SEMA4DQ92854 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SEMA4DQ92854 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.02■□□□□ 0.32
SEMA4DQ92854 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.02■□□□□ 0.32
SEMA4DQ92854 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SEMA4DQ92854 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.02■□□□□ 0.32
SEMA4DQ92854 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEMA4DQ92854 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms