Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.05□□□□□ -0.16
AP3S1Q92572 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
AP3S1Q92572 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
AP3S1Q92572 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 AL137784.3-201ENST00000623858 2288 ntBASIC14.05□□□□□ -0.16
AP3S1Q92572 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 AC091607.1-201ENST00000490318 1060 ntBASIC14.05□□□□□ -0.16
AP3S1Q92572 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.05□□□□□ -0.16
AP3S1Q92572 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 AC011498.5-201ENST00000592027 486 ntBASIC14.05□□□□□ -0.16
AP3S1Q92572 AL139424.1-201ENST00000607572 797 ntBASIC14.05□□□□□ -0.16
AP3S1Q92572 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.05□□□□□ -0.16
AP3S1Q92572 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP3S1Q92572 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 AC140479.7-201ENST00000636301 2332 ntBASIC14.05□□□□□ -0.16
AP3S1Q92572 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.05□□□□□ -0.16
AP3S1Q92572 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 ZBED1P1-201ENST00000502364 1930 ntBASIC14.05□□□□□ -0.16
AP3S1Q92572 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP3S1Q92572 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
AP3S1Q92572 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.05□□□□□ -0.16
AP3S1Q92572 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP3S1Q92572 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AP3S1Q92572 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
AP3S1Q92572 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
AP3S1Q92572 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AP3S1Q92572 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 RNF152P1-201ENST00000397754 604 ntBASIC14.04□□□□□ -0.16
AP3S1Q92572 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 FAM8A3P-201ENST00000427218 844 ntBASIC14.04□□□□□ -0.16
AP3S1Q92572 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.04□□□□□ -0.16
AP3S1Q92572 SPDYE13P-201ENST00000445314 798 ntBASIC14.04□□□□□ -0.16
AP3S1Q92572 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.04□□□□□ -0.16
AP3S1Q92572 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.04□□□□□ -0.16
AP3S1Q92572 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.04□□□□□ -0.16
AP3S1Q92572 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 CICP14-201ENST00000629111 2732 ntBASIC14.04□□□□□ -0.16
AP3S1Q92572 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP3S1Q92572 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AP3S1Q92572 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
AP3S1Q92572 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP3S1Q92572 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms