Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 AL080243.2-201ENST00000418783 582 ntBASIC16.87■□□□□ 0.29
DDX1Q92499 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 MTND6P24-201ENST00000440466 518 ntBASIC16.87■□□□□ 0.29
DDX1Q92499 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.87■□□□□ 0.29
DDX1Q92499 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.87■□□□□ 0.29
DDX1Q92499 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
DDX1Q92499 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
DDX1Q92499 AL390754.1-201ENST00000619088 582 ntBASIC16.87■□□□□ 0.29
DDX1Q92499 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.87■□□□□ 0.29
DDX1Q92499 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.87■□□□□ 0.29
DDX1Q92499 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
DDX1Q92499 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
DDX1Q92499 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.86■□□□□ 0.29
DDX1Q92499 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
DDX1Q92499 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.86■□□□□ 0.29
DDX1Q92499 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.86■□□□□ 0.29
DDX1Q92499 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
DDX1Q92499 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
DDX1Q92499 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.86■□□□□ 0.29
DDX1Q92499 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.86■□□□□ 0.29
DDX1Q92499 GPR53P-205ENST00000457298 1084 ntBASIC16.86■□□□□ 0.29
DDX1Q92499 RN7SL692P-201ENST00000464677 288 ntBASIC16.86■□□□□ 0.29
DDX1Q92499 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
DDX1Q92499 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
DDX1Q92499 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
DDX1Q92499 SPDYE22P-201ENST00000582158 798 ntBASIC16.86■□□□□ 0.29
DDX1Q92499 AC009118.2-201ENST00000613275 655 ntBASIC16.86■□□□□ 0.29
DDX1Q92499 AL662799.1-202ENST00000614205 422 ntBASIC16.86■□□□□ 0.29
DDX1Q92499 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.86■□□□□ 0.29
DDX1Q92499 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.86■□□□□ 0.29
DDX1Q92499 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 FO538757.1-201ENST00000623083 1397 ntBASIC16.86■□□□□ 0.29
DDX1Q92499 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 CU639417.3-201ENST00000624240 1404 ntBASIC16.86■□□□□ 0.29
DDX1Q92499 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
DDX1Q92499 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
DDX1Q92499 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
DDX1Q92499 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
DDX1Q92499 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
DDX1Q92499 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DDX1Q92499 AL109954.1-202ENST00000564051 2148 ntBASIC16.85■□□□□ 0.29
DDX1Q92499 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.85■□□□□ 0.29
DDX1Q92499 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
DDX1Q92499 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
DDX1Q92499 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.85■□□□□ 0.29
DDX1Q92499 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 COX5BP8-201ENST00000416911 349 ntBASIC16.85■□□□□ 0.29
DDX1Q92499 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.85■□□□□ 0.29
DDX1Q92499 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.85■□□□□ 0.29
DDX1Q92499 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
DDX1Q92499 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.85■□□□□ 0.29
DDX1Q92499 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.85■□□□□ 0.29
DDX1Q92499 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms