Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 RARRES2P8-201ENST00000566335 367 ntBASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 AL450472.2-201ENST00000603663 1156 ntBASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 AC023024.2-201ENST00000623561 1993 ntBASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 PDPK2P-202ENST00000562415 1191 ntBASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 AC034105.1-201ENST00000563488 319 ntBASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 AC145285.3-201ENST00000564603 959 ntBASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 SLC25A6P4-201ENST00000586535 553 ntBASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC44A1Q8WWI5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 EEF1DP4-201ENST00000446006 880 ntBASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms