Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FNDC9Q8TBE3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FNDC9Q8TBE3 AC103702.1-201ENST00000548801 2630 ntBASIC14.33□□□□□ -0.11
FNDC9Q8TBE3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.33□□□□□ -0.11
FNDC9Q8TBE3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FNDC9Q8TBE3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
FNDC9Q8TBE3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.33□□□□□ -0.11
FNDC9Q8TBE3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 AC004987.2-201ENST00000395959 1148 ntBASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 HAUS4P1-201ENST00000406739 1145 ntBASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 TERF1P3-201ENST00000505638 1227 ntBASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 SERBP1P5-201ENST00000510079 1181 ntBASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 AC138761.1-201ENST00000584393 385 ntBASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 AC008738.7-201ENST00000609744 511 ntBASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 MIR6069-201ENST00000620069 79 ntBASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 AC008761.3-201ENST00000624803 892 ntBASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FNDC9Q8TBE3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 AL513477.1-201ENST00000602865 2407 ntBASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 AC044860.1-202ENST00000559481 777 ntBASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms