Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.67■□□□□ 0.58
NKX2-3Q8TAU0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NKX2-3Q8TAU0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-3Q8TAU0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-3Q8TAU0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-3Q8TAU0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-3Q8TAU0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 AC098850.1-201ENST00000419919 790 ntBASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 RN7SL219P-201ENST00000582872 296 ntBASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 TMEM261P1-201ENST00000604899 340 ntBASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 AC074044.1-201ENST00000609673 707 ntBASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 MIR8072-201ENST00000614241 80 ntBASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-3Q8TAU0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 AC092337.1-201ENST00000568699 1129 ntBASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 HYMAI-201ENST00000635591 3347 ntBASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-3Q8TAU0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NKX2-3Q8TAU0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
NKX2-3Q8TAU0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
NKX2-3Q8TAU0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.64■□□□□ 0.58
NKX2-3Q8TAU0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 MYCLP2-201ENST00000449268 967 ntBASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 AC104989.1-201ENST00000519711 778 ntBASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.64■□□□□ 0.57
NKX2-3Q8TAU0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms