Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 RHPN1-AS1-201ENST00000518049 1918 ntBASIC9.7□□□□□ -0.86
SVIPQ8NHG7 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CD83-202ENST00000612003 2307 ntTSL 4 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 AP3B2-215ENST00000620652 3729 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 ARMC1-201ENST00000276569 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 ZNF565-201ENST00000304116 2023 ntAPPRIS P2 TSL 2 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 NRIP2-201ENST00000337508 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 UHRF2P1-201ENST00000431339 2387 ntBASIC9.69□□□□□ -0.86
SVIPQ8NHG7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 RBFOX2-210ENST00000449924 1935 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 AC135983.2-203ENST00000454486 1613 ntBASIC9.69□□□□□ -0.86
SVIPQ8NHG7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 IGHV3-75-201ENST00000523951 358 ntBASIC9.69□□□□□ -0.86
SVIPQ8NHG7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 STAM-AS1-201ENST00000563601 2595 ntBASIC9.69□□□□□ -0.86
SVIPQ8NHG7 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 STX12-201ENST00000373943 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 NMNAT2-202ENST00000294868 5448 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 GUCY1A3-204ENST00000455639 2631 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
SVIPQ8NHG7 FP700111.1-201ENST00000441760 2502 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 CEACAM19-201ENST00000358777 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 ZNF304-203ENST00000443917 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms