Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 HNRNPUP1-201ENST00000554987 333 ntBASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 AC044860.1-202ENST00000559481 777 ntBASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 AC009407.1-201ENST00000568958 598 ntBASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AC092127.1-201ENST00000567093 3455 ntBASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AL607033.1-201ENST00000623900 1599 ntBASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 TARDBPP1-201ENST00000442013 1203 ntBASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AC009477.1-201ENST00000452936 217 ntBASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 RNA5SP421-201ENST00000516864 134 ntBASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AC132872.1-201ENST00000566986 1195 ntBASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AJ011932.1-201ENST00000621707 465 ntBASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AL109936.8-201ENST00000641772 604 ntBASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SCUBE3Q8IX30 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 AC092850.2-201ENST00000623821 2697 ntBASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 AC136604.1-201ENST00000418535 575 ntBASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 AC025048.3-201ENST00000590609 569 ntBASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 AC005702.4-201ENST00000618393 416 ntBASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCUBE3Q8IX30 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms