Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 AC005237.2-201ENST00000434368 219 ntBASIC14.71□□□□□ -0.05
VRK2Q86Y07 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 AL450472.2-201ENST00000603663 1156 ntBASIC14.71□□□□□ -0.05
VRK2Q86Y07 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VRK2Q86Y07 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK2Q86Y07 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VRK2Q86Y07 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VRK2Q86Y07 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.71□□□□□ -0.06
VRK2Q86Y07 AL109954.1-202ENST00000564051 2148 ntBASIC14.71□□□□□ -0.06
VRK2Q86Y07 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.71□□□□□ -0.06
VRK2Q86Y07 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 AC023157.3-201ENST00000619086 2088 ntBASIC14.7□□□□□ -0.06
VRK2Q86Y07 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 FAM58DP-201ENST00000428076 619 ntBASIC14.7□□□□□ -0.06
VRK2Q86Y07 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.7□□□□□ -0.06
VRK2Q86Y07 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 MIR4469-201ENST00000583919 79 ntBASIC14.7□□□□□ -0.06
VRK2Q86Y07 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.7□□□□□ -0.06
VRK2Q86Y07 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 AC006486.2-201ENST00000624246 2199 ntBASIC14.7□□□□□ -0.06
VRK2Q86Y07 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK2Q86Y07 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK2Q86Y07 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VRK2Q86Y07 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK2Q86Y07 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VRK2Q86Y07 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.69□□□□□ -0.06
VRK2Q86Y07 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
VRK2Q86Y07 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK2Q86Y07 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VRK2Q86Y07 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK2Q86Y07 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK2Q86Y07 AC023824.1-201ENST00000562945 2975 ntBASIC14.69□□□□□ -0.06
VRK2Q86Y07 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
VRK2Q86Y07 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.69□□□□□ -0.06
VRK2Q86Y07 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK2Q86Y07 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VRK2Q86Y07 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VRK2Q86Y07 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.69□□□□□ -0.06
VRK2Q86Y07 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.69□□□□□ -0.06
VRK2Q86Y07 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.69□□□□□ -0.06
VRK2Q86Y07 DNAJB3-201ENST00000446806 729 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms