Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 AC018695.7-201ENST00000624587 2492 ntBASIC17.66■□□□□ 0.42
TRIM50Q86XT4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM50Q86XT4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 AC017083.2-201ENST00000608069 979 ntBASIC17.65■□□□□ 0.42
TRIM50Q86XT4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM50Q86XT4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM50Q86XT4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM50Q86XT4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM50Q86XT4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 AL596087.1-201ENST00000400979 1969 ntBASIC17.64■□□□□ 0.41
TRIM50Q86XT4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 CROCCP4-201ENST00000457096 498 ntBASIC17.64■□□□□ 0.41
TRIM50Q86XT4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 AL359711.2-201ENST00000563105 872 ntBASIC17.64■□□□□ 0.41
TRIM50Q86XT4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 AL512343.1-201ENST00000605837 169 ntBASIC17.64■□□□□ 0.41
TRIM50Q86XT4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 LINC02199-201ENST00000506655 2702 ntBASIC17.64■□□□□ 0.41
TRIM50Q86XT4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM50Q86XT4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms