Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 AL365209.1-201ENST00000624418 6473 ntBASIC15.24■□□□□ 0.03
RNF44Q7L0R7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 FAM207CP-201ENST00000443486 507 ntBASIC15.24■□□□□ 0.03
RNF44Q7L0R7 PHKG1P2-201ENST00000457537 863 ntBASIC15.24■□□□□ 0.03
RNF44Q7L0R7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 AC074044.1-201ENST00000609673 707 ntBASIC15.24■□□□□ 0.03
RNF44Q7L0R7 AC004840.1-201ENST00000636359 365 ntBASIC15.24■□□□□ 0.03
RNF44Q7L0R7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF44Q7L0R7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AC024909.3-201ENST00000611513 2257 ntBASIC15.23■□□□□ 0.03
RNF44Q7L0R7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AC114501.2-201ENST00000439631 535 ntBASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 TSPY16P-201ENST00000449843 468 ntBASIC15.23■□□□□ 0.03
RNF44Q7L0R7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 HNRNPUP1-201ENST00000554987 333 ntBASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 MIR4745-201ENST00000577608 62 ntBASIC15.23■□□□□ 0.03
RNF44Q7L0R7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AC092364.2-202ENST00000597012 1073 ntBASIC15.23■□□□□ 0.03
RNF44Q7L0R7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AL109936.8-201ENST00000641772 604 ntBASIC15.23■□□□□ 0.03
RNF44Q7L0R7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF44Q7L0R7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms