Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 GGT3P-204ENST00000453783 1664 ntBASIC13.96□□□□□ -0.17
C11orf88Q6PI97 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 AC008735.5-201ENST00000623544 497 ntBASIC13.96□□□□□ -0.17
C11orf88Q6PI97 AC148477.8-201ENST00000624298 468 ntBASIC13.96□□□□□ -0.17
C11orf88Q6PI97 AC073592.5-201ENST00000624854 528 ntBASIC13.96□□□□□ -0.17
C11orf88Q6PI97 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 KRT8P49-201ENST00000604166 1432 ntBASIC13.96□□□□□ -0.18
C11orf88Q6PI97 AC106881.1-201ENST00000605849 3329 ntBASIC13.96□□□□□ -0.18
C11orf88Q6PI97 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 AC243591.1-201ENST00000452967 1364 ntBASIC13.96□□□□□ -0.18
C11orf88Q6PI97 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
C11orf88Q6PI97 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 AC131212.3-201ENST00000624087 4219 ntBASIC13.95□□□□□ -0.18
C11orf88Q6PI97 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 AC104581.4-201ENST00000623126 3052 ntBASIC13.95□□□□□ -0.18
C11orf88Q6PI97 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 CICP4-201ENST00000447359 2812 ntBASIC13.95□□□□□ -0.18
C11orf88Q6PI97 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 ACTG1P4-201ENST00000425123 1122 ntBASIC13.95□□□□□ -0.18
C11orf88Q6PI97 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 AC027601.4-201ENST00000611259 610 ntBASIC13.95□□□□□ -0.18
C11orf88Q6PI97 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 AC116407.3-201ENST00000623905 1129 ntBASIC13.95□□□□□ -0.18
C11orf88Q6PI97 AL022326.1-202ENST00000641533 845 ntBASIC13.95□□□□□ -0.18
C11orf88Q6PI97 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.95□□□□□ -0.18
C11orf88Q6PI97 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.95□□□□□ -0.18
C11orf88Q6PI97 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms