Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 MIR4313-201ENST00000580760 101 ntBASIC18.82■□□□□ 0.6
CTR9Q6PD62 AC099568.2-201ENST00000609194 695 ntBASIC18.82■□□□□ 0.6
CTR9Q6PD62 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 AC010491.1-201ENST00000563101 2797 ntBASIC18.81■□□□□ 0.6
CTR9Q6PD62 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 AC098850.1-201ENST00000419919 790 ntBASIC18.81■□□□□ 0.6
CTR9Q6PD62 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 RARRES2P5-201ENST00000564013 466 ntBASIC18.81■□□□□ 0.6
CTR9Q6PD62 WASH4P-201ENST00000564273 1246 ntBASIC18.81■□□□□ 0.6
CTR9Q6PD62 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 AC027307.3-201ENST00000594262 1100 ntBASIC18.81■□□□□ 0.6
CTR9Q6PD62 AC008494.3-201ENST00000606615 944 ntBASIC18.81■□□□□ 0.6
CTR9Q6PD62 MIR8072-201ENST00000614241 80 ntBASIC18.81■□□□□ 0.6
CTR9Q6PD62 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.81■□□□□ 0.6
CTR9Q6PD62 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTR9Q6PD62 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 RN7SL692P-201ENST00000464677 288 ntBASIC18.8■□□□□ 0.6
CTR9Q6PD62 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 AC012645.4-201ENST00000610691 1061 ntBASIC18.8■□□□□ 0.6
CTR9Q6PD62 AL158212.4-201ENST00000624062 1286 ntBASIC18.8■□□□□ 0.6
CTR9Q6PD62 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.8■□□□□ 0.6
CTR9Q6PD62 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTR9Q6PD62 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms