Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 AC036164.1-201ENST00000570544 333 ntBASIC19.26■□□□□ 0.67
TNNI3KQ59H18 AC000095.1-201ENST00000603208 874 ntBASIC19.26■□□□□ 0.67
TNNI3KQ59H18 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TNNI3KQ59H18 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.25■□□□□ 0.67
TNNI3KQ59H18 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 DGCR5-201ENST00000399539 862 ntBASIC19.25■□□□□ 0.67
TNNI3KQ59H18 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 ELK1P1-201ENST00000485699 580 ntBASIC19.25■□□□□ 0.67
TNNI3KQ59H18 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 AC015910.1-201ENST00000579400 975 ntBASIC19.25■□□□□ 0.67
TNNI3KQ59H18 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.25■□□□□ 0.67
TNNI3KQ59H18 AC008741.2-201ENST00000612792 3115 ntBASIC19.25■□□□□ 0.67
TNNI3KQ59H18 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.24■□□□□ 0.67
TNNI3KQ59H18 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 AL133267.1-201ENST00000398220 340 ntBASIC19.24■□□□□ 0.67
TNNI3KQ59H18 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 MYCLP2-201ENST00000449268 967 ntBASIC19.24■□□□□ 0.67
TNNI3KQ59H18 FAM86LP-201ENST00000478302 853 ntBASIC19.24■□□□□ 0.67
TNNI3KQ59H18 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 CTBP2P3-201ENST00000585629 1255 ntBASIC19.24■□□□□ 0.67
TNNI3KQ59H18 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNNI3KQ59H18 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms