Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 AL645728.2-202ENST00000641679 227 ntBASIC18.83■□□□□ 0.61
PDS5AQ29RF7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PDS5AQ29RF7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDS5AQ29RF7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.82■□□□□ 0.6
PDS5AQ29RF7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 AP000812.2-201ENST00000538934 718 ntBASIC18.82■□□□□ 0.6
PDS5AQ29RF7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 AC025181.2-201ENST00000606994 802 ntBASIC18.82■□□□□ 0.6
PDS5AQ29RF7 MIR6775-201ENST00000617557 69 ntBASIC18.82■□□□□ 0.6
PDS5AQ29RF7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 AL513523.2-202ENST00000427283 2040 ntBASIC18.82■□□□□ 0.6
PDS5AQ29RF7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDS5AQ29RF7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 AL355864.2-201ENST00000447420 863 ntBASIC18.81■□□□□ 0.6
PDS5AQ29RF7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PDS5AQ29RF7 GNRHR2-203ENST00000581100 1187 ntBASIC18.81■□□□□ 0.6
PDS5AQ29RF7 MIR4259-201ENST00000584466 101 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms