Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCS1Q01581 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
HMGCS1Q01581 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HMGCS1Q01581 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.33■□□□□ 0.05
HMGCS1Q01581 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HMGCS1Q01581 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.33■□□□□ 0.05
HMGCS1Q01581 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.05
HMGCS1Q01581 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HMGCS1Q01581 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HMGCS1Q01581 CYP4F24P-201ENST00000586049 1580 ntBASIC15.33■□□□□ 0.05
HMGCS1Q01581 AP3S2-216ENST00000617003 1561 ntBASIC15.33■□□□□ 0.05
HMGCS1Q01581 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 AL592309.1-201ENST00000443127 649 ntBASIC15.33■□□□□ 0.04
HMGCS1Q01581 DNAJB3-201ENST00000446806 729 ntBASIC15.33■□□□□ 0.04
HMGCS1Q01581 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 KRT8P23-201ENST00000560090 1207 ntBASIC15.33■□□□□ 0.04
HMGCS1Q01581 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCS1Q01581 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCS1Q01581 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 ACTG1P14-201ENST00000446382 1122 ntBASIC15.32■□□□□ 0.04
HMGCS1Q01581 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 AC092865.5-201ENST00000545435 363 ntBASIC15.32■□□□□ 0.04
HMGCS1Q01581 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.32■□□□□ 0.04
HMGCS1Q01581 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCS1Q01581 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HMGCS1Q01581 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms