Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.18□□□□□ -0.14
EFNB1P98172 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNB1P98172 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
EFNB1P98172 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
EFNB1P98172 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.17□□□□□ -0.14
EFNB1P98172 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
EFNB1P98172 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.17□□□□□ -0.14
EFNB1P98172 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
EFNB1P98172 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.17□□□□□ -0.14
EFNB1P98172 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 ACE3P-201ENST00000423435 1973 ntBASIC14.17□□□□□ -0.14
EFNB1P98172 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
EFNB1P98172 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 MIR346-201ENST00000362234 95 ntBASIC14.17□□□□□ -0.14
EFNB1P98172 RPL5P21-201ENST00000404620 815 ntBASIC14.17□□□□□ -0.14
EFNB1P98172 MIR1224-201ENST00000408193 85 ntBASIC14.17□□□□□ -0.14
EFNB1P98172 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.17□□□□□ -0.14
EFNB1P98172 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.17□□□□□ -0.14
EFNB1P98172 RARRES2P8-201ENST00000566335 367 ntBASIC14.17□□□□□ -0.14
EFNB1P98172 AC018845.2-201ENST00000568326 409 ntBASIC14.17□□□□□ -0.14
EFNB1P98172 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.17□□□□□ -0.14
EFNB1P98172 AC068137.2-201ENST00000605408 478 ntBASIC14.17□□□□□ -0.14
EFNB1P98172 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.17□□□□□ -0.14
EFNB1P98172 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.17□□□□□ -0.14
EFNB1P98172 AL031008.1-201ENST00000619963 541 ntBASIC14.17□□□□□ -0.14
EFNB1P98172 AC008267.7-201ENST00000624570 1194 ntBASIC14.17□□□□□ -0.14
EFNB1P98172 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.17□□□□□ -0.14
EFNB1P98172 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
EFNB1P98172 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
EFNB1P98172 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
EFNB1P98172 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.17□□□□□ -0.14
EFNB1P98172 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNB1P98172 AKAP8P1-201ENST00000434743 1349 ntBASIC14.16□□□□□ -0.14
EFNB1P98172 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNB1P98172 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNB1P98172 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
EFNB1P98172 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.16□□□□□ -0.14
EFNB1P98172 AL139010.1-201ENST00000454878 894 ntBASIC14.16□□□□□ -0.14
EFNB1P98172 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.16□□□□□ -0.14
EFNB1P98172 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNB1P98172 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.16□□□□□ -0.14
EFNB1P98172 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNB1P98172 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
EFNB1P98172 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNB1P98172 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.16□□□□□ -0.14
EFNB1P98172 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.16□□□□□ -0.14
EFNB1P98172 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
EFNB1P98172 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms