Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 LINC00528-201ENST00000600723 2160 ntBASIC13□□□□□ -0.33
RAB11AP62491 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13□□□□□ -0.33
RAB11AP62491 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13□□□□□ -0.33
RAB11AP62491 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 AC020658.6-201ENST00000623564 1870 ntBASIC12.99□□□□□ -0.33
RAB11AP62491 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
RAB11AP62491 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB11AP62491 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RAB11AP62491 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RAB11AP62491 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB11AP62491 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB11AP62491 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB11AP62491 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB11AP62491 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.99□□□□□ -0.33
RAB11AP62491 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
RAB11AP62491 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB11AP62491 AC091076.1-201ENST00000610741 619 ntBASIC12.99□□□□□ -0.33
RAB11AP62491 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB11AP62491 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAB11AP62491 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RAB11AP62491 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
RAB11AP62491 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAB11AP62491 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAB11AP62491 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB11AP62491 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RAB11AP62491 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB11AP62491 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB11AP62491 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RAB11AP62491 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RAB11AP62491 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 AC087481.3-201ENST00000602886 1894 ntBASIC12.98□□□□□ -0.33
RAB11AP62491 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms