Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH11P55287 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH11P55287 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH11P55287 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CDH11P55287 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 AC002056.1-201ENST00000395613 760 ntBASIC14.62□□□□□ -0.07
CDH11P55287 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH11P55287 AP000344.2-201ENST00000512987 629 ntBASIC14.62□□□□□ -0.07
CDH11P55287 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH11P55287 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDH11P55287 AC087481.3-201ENST00000602886 1894 ntBASIC14.62□□□□□ -0.07
CDH11P55287 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDH11P55287 AC092902.6-201ENST00000641783 218 ntBASIC14.62□□□□□ -0.07
CDH11P55287 AL645728.2-201ENST00000641974 660 ntBASIC14.62□□□□□ -0.07
CDH11P55287 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CDH11P55287 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH11P55287 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH11P55287 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDH11P55287 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH11P55287 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CDH11P55287 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH11P55287 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 MYO15B-237ENST00000642007 4893 ntBASIC14.61□□□□□ -0.07
CDH11P55287 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDH11P55287 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDH11P55287 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CDH11P55287 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CDH11P55287 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH11P55287 AP002472.1-201ENST00000577490 586 ntBASIC14.61□□□□□ -0.07
CDH11P55287 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH11P55287 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.61□□□□□ -0.07
CDH11P55287 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH11P55287 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.61□□□□□ -0.07
CDH11P55287 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH11P55287 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH11P55287 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDH11P55287 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH11P55287 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDH11P55287 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH11P55287 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms