Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.49■□□□□ 0.39
GPC3P51654 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 AL158212.4-201ENST00000624062 1286 ntBASIC17.49■□□□□ 0.39
GPC3P51654 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.49■□□□□ 0.39
GPC3P51654 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GPC3P51654 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
GPC3P51654 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC3P51654 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
GPC3P51654 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC3P51654 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.48■□□□□ 0.39
GPC3P51654 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC3P51654 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.48■□□□□ 0.39
GPC3P51654 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC3P51654 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 HNRNPUP1-201ENST00000554987 333 ntBASIC17.48■□□□□ 0.39
GPC3P51654 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.48■□□□□ 0.39
GPC3P51654 AL450472.2-201ENST00000603663 1156 ntBASIC17.48■□□□□ 0.39
GPC3P51654 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.48■□□□□ 0.39
GPC3P51654 MIR8072-201ENST00000614241 80 ntBASIC17.48■□□□□ 0.39
GPC3P51654 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.48■□□□□ 0.39
GPC3P51654 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
GPC3P51654 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC3P51654 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GPC3P51654 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GPC3P51654 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
GPC3P51654 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC3P51654 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 AL512384.1-201ENST00000406683 331 ntBASIC17.47■□□□□ 0.39
GPC3P51654 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.47■□□□□ 0.39
GPC3P51654 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC3P51654 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 GIMAP3P-201ENST00000495150 836 ntBASIC17.47■□□□□ 0.39
GPC3P51654 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
GPC3P51654 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.47■□□□□ 0.39
GPC3P51654 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 AC132938.2-201ENST00000579188 680 ntBASIC17.47■□□□□ 0.39
GPC3P51654 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 AL591163.1-201ENST00000641757 987 ntBASIC17.47■□□□□ 0.39
GPC3P51654 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms