Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR4P51571 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SSR4P51571 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.53□□□□□ -0.08
SSR4P51571 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SSR4P51571 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SSR4P51571 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSR4P51571 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR4P51571 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSR4P51571 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR4P51571 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 AC138969.3-201ENST00000546612 1459 ntBASIC14.53□□□□□ -0.08
SSR4P51571 AC138932.2-201ENST00000548268 1459 ntBASIC14.53□□□□□ -0.08
SSR4P51571 AC126755.4-201ENST00000549796 1459 ntBASIC14.53□□□□□ -0.08
SSR4P51571 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR4P51571 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.53□□□□□ -0.08
SSR4P51571 DGCR5-201ENST00000399539 862 ntBASIC14.53□□□□□ -0.08
SSR4P51571 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.53□□□□□ -0.08
SSR4P51571 TOMM22P5-201ENST00000416399 439 ntBASIC14.53□□□□□ -0.08
SSR4P51571 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.53□□□□□ -0.08
SSR4P51571 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.53□□□□□ -0.08
SSR4P51571 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.53□□□□□ -0.08
SSR4P51571 AL158212.4-201ENST00000624062 1286 ntBASIC14.53□□□□□ -0.08
SSR4P51571 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SSR4P51571 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSR4P51571 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
SSR4P51571 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SSR4P51571 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR4P51571 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.53□□□□□ -0.08
SSR4P51571 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR4P51571 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSR4P51571 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.52□□□□□ -0.08
SSR4P51571 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.52□□□□□ -0.08
SSR4P51571 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.52□□□□□ -0.08
SSR4P51571 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR4P51571 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SSR4P51571 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
SSR4P51571 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SSR4P51571 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.52□□□□□ -0.08
SSR4P51571 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR4P51571 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSR4P51571 CU639417.3-201ENST00000624240 1404 ntBASIC14.52□□□□□ -0.08
SSR4P51571 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SSR4P51571 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR4P51571 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR4P51571 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.52□□□□□ -0.08
SSR4P51571 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR4P51571 PKD1P5-201ENST00000532415 10291 ntBASIC14.52□□□□□ -0.08
SSR4P51571 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR4P51571 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
SSR4P51571 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SSR4P51571 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.52□□□□□ -0.09
SSR4P51571 KRT18P64-201ENST00000434946 1219 ntBASIC14.52□□□□□ -0.09
SSR4P51571 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.52□□□□□ -0.09
SSR4P51571 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR4P51571 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR4P51571 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 GAPDHP21-201ENST00000450301 1010 ntBASIC14.52□□□□□ -0.09
SSR4P51571 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR4P51571 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.52□□□□□ -0.09
SSR4P51571 CR383656.12-201ENST00000549567 513 ntBASIC14.52□□□□□ -0.09
SSR4P51571 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.52□□□□□ -0.09
SSR4P51571 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.52□□□□□ -0.09
SSR4P51571 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.52□□□□□ -0.09
SSR4P51571 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SSR4P51571 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR4P51571 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
SSR4P51571 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR4P51571 PCDHB19P-201ENST00000570871 2371 ntBASIC14.52□□□□□ -0.09
SSR4P51571 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR4P51571 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.52□□□□□ -0.09
SSR4P51571 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
SSR4P51571 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SSR4P51571 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
SSR4P51571 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms