Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX3P48380 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX3P48380 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.01□□□□□ -0.01
RFX3P48380 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.01□□□□□ -0.01
RFX3P48380 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX3P48380 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX3P48380 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RFX3P48380 MIR648-201ENST00000385046 94 ntBASIC15.01□□□□□ -0.01
RFX3P48380 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX3P48380 HAUS4P1-201ENST00000406739 1145 ntBASIC15.01□□□□□ -0.01
RFX3P48380 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFX3P48380 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.01□□□□□ -0.01
RFX3P48380 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.01□□□□□ -0.01
RFX3P48380 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.01□□□□□ -0.01
RFX3P48380 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.01□□□□□ -0.01
RFX3P48380 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX3P48380 AC004835.2-201ENST00000603762 682 ntBASIC15.01□□□□□ -0.01
RFX3P48380 AC055717.3-201ENST00000622967 595 ntBASIC15.01□□□□□ -0.01
RFX3P48380 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RFX3P48380 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX3P48380 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RFX3P48380 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.01□□□□□ -0.01
RFX3P48380 SBF1P1-201ENST00000444527 5631 ntBASIC15.01□□□□□ -0.01
RFX3P48380 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFX3P48380 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX3P48380 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15□□□□□ -0.01
RFX3P48380 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RFX3P48380 CDC14C-201ENST00000428251 1719 ntBASIC15□□□□□ -0.01
RFX3P48380 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15□□□□□ -0.01
RFX3P48380 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15□□□□□ -0.01
RFX3P48380 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15□□□□□ -0.01
RFX3P48380 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RFX3P48380 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFX3P48380 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFX3P48380 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFX3P48380 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15□□□□□ -0.01
RFX3P48380 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15□□□□□ -0.01
RFX3P48380 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15□□□□□ -0.01
RFX3P48380 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15□□□□□ -0.01
RFX3P48380 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RFX3P48380 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15□□□□□ -0.01
RFX3P48380 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RFX3P48380 KRT8P23-201ENST00000560090 1207 ntBASIC15□□□□□ -0.01
RFX3P48380 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15□□□□□ -0.01
RFX3P48380 AC024267.1-201ENST00000582320 895 ntBASIC15□□□□□ -0.01
RFX3P48380 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15□□□□□ -0.01
RFX3P48380 AL513210.1-201ENST00000629608 234 ntBASIC15□□□□□ -0.01
RFX3P48380 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15□□□□□ -0.01
RFX3P48380 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
RFX3P48380 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RFX3P48380 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RFX3P48380 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RFX3P48380 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15□□□□□ -0.01
RFX3P48380 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFX3P48380 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX3P48380 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX3P48380 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFX3P48380 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX3P48380 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX3P48380 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RFX3P48380 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFX3P48380 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms