Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MYO15B-237ENST00000642007 4893 ntBASIC15.19■□□□□ 0.02
KRT20P35900 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
KRT20P35900 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 RPSAP43-201ENST00000402237 625 ntBASIC15.19■□□□□ 0.02
KRT20P35900 MIR1233-2-201ENST00000408138 82 ntBASIC15.19■□□□□ 0.02
KRT20P35900 MIR1233-1-201ENST00000408722 82 ntBASIC15.19■□□□□ 0.02
KRT20P35900 AC211486.1-202ENST00000416371 468 ntBASIC15.19■□□□□ 0.02
KRT20P35900 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT20P35900 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.19■□□□□ 0.02
KRT20P35900 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.19■□□□□ 0.02
KRT20P35900 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 AC112482.1-201ENST00000492080 688 ntBASIC15.19■□□□□ 0.02
KRT20P35900 AC211476.1-201ENST00000503899 468 ntBASIC15.19■□□□□ 0.02
KRT20P35900 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
KRT20P35900 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT20P35900 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
KRT20P35900 AC005622.1-201ENST00000636801 1703 ntBASIC15.19■□□□□ 0.02
KRT20P35900 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KRT20P35900 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT20P35900 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KRT20P35900 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT20P35900 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 REXO1L8P-201ENST00000604378 1897 ntBASIC15.18■□□□□ 0.02
KRT20P35900 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT20P35900 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
KRT20P35900 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT20P35900 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT20P35900 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KRT20P35900 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
KRT20P35900 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KRT20P35900 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT20P35900 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
KRT20P35900 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT20P35900 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KRT20P35900 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KRT20P35900 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT20P35900 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT20P35900 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KRT20P35900 AC079781.4-201ENST00000641908 219 ntBASIC15.18■□□□□ 0.02
KRT20P35900 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT20P35900 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT20P35900 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
KRT20P35900 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT20P35900 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
KRT20P35900 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 AC073439.1-201ENST00000624121 1774 ntBASIC15.17■□□□□ 0.02
KRT20P35900 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms