Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC21.06■□□□□ 0.96
USP6P35125 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP6P35125 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
USP6P35125 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.06■□□□□ 0.96
USP6P35125 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.06■□□□□ 0.96
USP6P35125 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.06■□□□□ 0.96
USP6P35125 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.06■□□□□ 0.96
USP6P35125 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC21.06■□□□□ 0.96
USP6P35125 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.06■□□□□ 0.96
USP6P35125 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6P35125 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.05■□□□□ 0.96
USP6P35125 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6P35125 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC21.05■□□□□ 0.96
USP6P35125 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
USP6P35125 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC21.05■□□□□ 0.96
USP6P35125 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
USP6P35125 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC21.05■□□□□ 0.96
USP6P35125 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC21.05■□□□□ 0.96
USP6P35125 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.05■□□□□ 0.96
USP6P35125 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6P35125 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP6P35125 AP003171.2-201ENST00000528208 925 ntBASIC21.05■□□□□ 0.96
USP6P35125 AP001258.2-201ENST00000529891 490 ntBASIC21.05■□□□□ 0.96
USP6P35125 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC21.05■□□□□ 0.96
USP6P35125 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
USP6P35125 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC21.05■□□□□ 0.96
USP6P35125 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
USP6P35125 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC21.05■□□□□ 0.96
USP6P35125 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
USP6P35125 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC21.05■□□□□ 0.96
USP6P35125 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC21.05■□□□□ 0.96
USP6P35125 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.05■□□□□ 0.96
USP6P35125 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6P35125 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC21.05■□□□□ 0.96
USP6P35125 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6P35125 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6P35125 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
USP6P35125 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6P35125 AL354989.2-201ENST00000435838 1540 ntBASIC21.05■□□□□ 0.96
USP6P35125 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6P35125 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.05■□□□□ 0.96
USP6P35125 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC21.05■□□□□ 0.96
USP6P35125 AMT-224ENST00000635808 1610 ntTSL 5 BASIC21.05■□□□□ 0.96
USP6P35125 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
USP6P35125 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
USP6P35125 MIR663B-201ENST00000408361 115 ntBASIC21.04■□□□□ 0.96
USP6P35125 EIF3FP3-201ENST00000434851 1086 ntBASIC21.04■□□□□ 0.96
USP6P35125 AC004898.1-201ENST00000451057 766 ntBASIC21.04■□□□□ 0.96
USP6P35125 PFN2-205ENST00000461868 613 ntTSL 2 BASIC21.04■□□□□ 0.96
USP6P35125 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC21.04■□□□□ 0.96
USP6P35125 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
USP6P35125 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
USP6P35125 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
USP6P35125 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP6P35125 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
USP6P35125 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP6P35125 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC21.04■□□□□ 0.96
USP6P35125 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC21.04■□□□□ 0.96
USP6P35125 NUS1P3-201ENST00000423502 862 ntBASIC21.04■□□□□ 0.96
USP6P35125 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC21.04■□□□□ 0.96
USP6P35125 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC21.04■□□□□ 0.96
USP6P35125 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.04■□□□□ 0.96
USP6P35125 APOA2-204ENST00000464492 530 ntTSL 3 BASIC21.04■□□□□ 0.96
USP6P35125 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC21.04■□□□□ 0.96
USP6P35125 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6P35125 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC21.04■□□□□ 0.96
USP6P35125 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC21.04■□□□□ 0.96
USP6P35125 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC21.04■□□□□ 0.96
USP6P35125 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
USP6P35125 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6P35125 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6P35125 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 AL023775.1-201ENST00000454907 1746 ntBASIC21.03■□□□□ 0.96
USP6P35125 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms