Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.92■■□□□ 1.1
CPS1P31327 ALOX12P2-203ENST00000570921 1945 ntBASIC21.92■■□□□ 1.1
CPS1P31327 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.92■■□□□ 1.1
CPS1P31327 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.92■■□□□ 1.1
CPS1P31327 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC21.92■■□□□ 1.1
CPS1P31327 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
CPS1P31327 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC21.91■■□□□ 1.1
CPS1P31327 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 IDS-203ENST00000428056 1213 ntTSL 2 BASIC21.91■■□□□ 1.1
CPS1P31327 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC21.91■■□□□ 1.1
CPS1P31327 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC21.91■■□□□ 1.1
CPS1P31327 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC21.91■■□□□ 1.1
CPS1P31327 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC21.91■■□□□ 1.1
CPS1P31327 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC21.91■■□□□ 1.1
CPS1P31327 AC087045.2-201ENST00000606279 1003 ntBASIC21.91■■□□□ 1.1
CPS1P31327 AL023803.2-201ENST00000620080 638 ntBASIC21.91■■□□□ 1.1
CPS1P31327 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CPS1P31327 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.91■■□□□ 1.1
CPS1P31327 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CPS1P31327 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CPS1P31327 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC21.91■■□□□ 1.1
CPS1P31327 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPS1P31327 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CPS1P31327 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CPS1P31327 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC21.91■■□□□ 1.1
CPS1P31327 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.91■■□□□ 1.1
CPS1P31327 TPM3P8-201ENST00000330554 643 ntBASIC21.9■■□□□ 1.1
CPS1P31327 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CPS1P31327 AC010234.1-201ENST00000494599 870 ntBASIC21.9■■□□□ 1.1
CPS1P31327 MARK2P5-201ENST00000507649 634 ntBASIC21.9■■□□□ 1.1
CPS1P31327 IGHV3-37-201ENST00000518544 340 ntBASIC21.9■■□□□ 1.1
CPS1P31327 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CPS1P31327 ZACNP1-201ENST00000612259 710 ntBASIC21.9■■□□□ 1.1
CPS1P31327 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CPS1P31327 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
CPS1P31327 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.9■■□□□ 1.1
CPS1P31327 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
CPS1P31327 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CPS1P31327 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
CPS1P31327 AC006449.6-201ENST00000612330 2296 ntBASIC21.9■■□□□ 1.1
CPS1P31327 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CPS1P31327 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CPS1P31327 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.9■■□□□ 1.1
CPS1P31327 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC21.9■■□□□ 1.1
CPS1P31327 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC21.9■■□□□ 1.1
CPS1P31327 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CPS1P31327 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC21.9■■□□□ 1.1
CPS1P31327 AL139008.1-201ENST00000437894 228 ntBASIC21.9■■□□□ 1.1
CPS1P31327 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC21.9■■□□□ 1.1
CPS1P31327 RN7SL713P-201ENST00000582127 302 ntBASIC21.9■■□□□ 1.1
CPS1P31327 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 AC073413.1-201ENST00000603927 732 ntBASIC21.9■■□□□ 1.1
CPS1P31327 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC21.9■■□□□ 1.1
CPS1P31327 AP001002.3-201ENST00000623482 206 ntBASIC21.9■■□□□ 1.1
CPS1P31327 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC21.9■■□□□ 1.1
CPS1P31327 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC21.9■■□□□ 1.1
CPS1P31327 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPS1P31327 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPS1P31327 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPS1P31327 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPS1P31327 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPS1P31327 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPS1P31327 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPS1P31327 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPS1P31327 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.89■■□□□ 1.09
CPS1P31327 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.89■■□□□ 1.09
CPS1P31327 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPS1P31327 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPS1P31327 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms