Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.38■□□□□ 0.53
CDC27P30260 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDC27P30260 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC27P30260 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDC27P30260 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC27P30260 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC27P30260 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.37■□□□□ 0.53
CDC27P30260 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDC27P30260 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC27P30260 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC27P30260 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC27P30260 AC093214.1-201ENST00000511688 1107 ntBASIC18.37■□□□□ 0.53
CDC27P30260 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC27P30260 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDC27P30260 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC27P30260 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC27P30260 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC27P30260 AC004790.1-201ENST00000612686 536 ntBASIC18.37■□□□□ 0.53
CDC27P30260 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CDC27P30260 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC27P30260 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC27P30260 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC27P30260 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC27P30260 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC27P30260 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC27P30260 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC27P30260 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDC27P30260 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDC27P30260 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDC27P30260 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC27P30260 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC27P30260 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDC27P30260 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 SDHAP3-202ENST00000515467 728 ntBASIC18.36■□□□□ 0.53
CDC27P30260 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC27P30260 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 AC074044.1-201ENST00000609673 707 ntBASIC18.36■□□□□ 0.53
CDC27P30260 AC004461.2-201ENST00000629517 803 ntBASIC18.36■□□□□ 0.53
CDC27P30260 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC27P30260 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC27P30260 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDC27P30260 AC144831.1-201ENST00000573312 2656 ntBASIC18.36■□□□□ 0.53
CDC27P30260 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDC27P30260 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC27P30260 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDC27P30260 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC27P30260 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 AC022144.1-201ENST00000602255 1580 ntBASIC18.35■□□□□ 0.53
CDC27P30260 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDC27P30260 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC27P30260 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms