Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTR1BP28222 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HTR1BP28222 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HTR1BP28222 AC063926.2-201ENST00000623766 1308 ntBASIC15.86■□□□□ 0.13
HTR1BP28222 AL391825.1-201ENST00000457671 1364 ntBASIC15.86■□□□□ 0.13
HTR1BP28222 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTR1BP28222 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.86■□□□□ 0.13
HTR1BP28222 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTR1BP28222 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 AL691432.1-201ENST00000596308 1422 ntBASIC15.85■□□□□ 0.13
HTR1BP28222 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HTR1BP28222 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.85■□□□□ 0.13
HTR1BP28222 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.85■□□□□ 0.13
HTR1BP28222 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HTR1BP28222 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HTR1BP28222 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 AC005034.1-201ENST00000426657 489 ntBASIC15.85■□□□□ 0.13
HTR1BP28222 DFFBP1-201ENST00000433250 979 ntBASIC15.85■□□□□ 0.13
HTR1BP28222 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.85■□□□□ 0.13
HTR1BP28222 AC093004.1-201ENST00000508850 424 ntBASIC15.85■□□□□ 0.13
HTR1BP28222 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.85■□□□□ 0.13
HTR1BP28222 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.85■□□□□ 0.13
HTR1BP28222 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.85■□□□□ 0.13
HTR1BP28222 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.85■□□□□ 0.13
HTR1BP28222 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 ALOX12P2-203ENST00000570921 1945 ntBASIC15.85■□□□□ 0.13
HTR1BP28222 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTR1BP28222 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HTR1BP28222 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
HTR1BP28222 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.85■□□□□ 0.13
HTR1BP28222 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HTR1BP28222 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
HTR1BP28222 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.84■□□□□ 0.13
HTR1BP28222 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HTR1BP28222 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.84■□□□□ 0.13
HTR1BP28222 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HTR1BP28222 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HTR1BP28222 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HTR1BP28222 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HTR1BP28222 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.84■□□□□ 0.13
HTR1BP28222 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
HTR1BP28222 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
HTR1BP28222 SPDYE19P-201ENST00000338590 713 ntBASIC15.84■□□□□ 0.13
HTR1BP28222 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 MEP1AP4-201ENST00000423244 1087 ntBASIC15.84■□□□□ 0.13
HTR1BP28222 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.84■□□□□ 0.13
HTR1BP28222 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.84■□□□□ 0.13
HTR1BP28222 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.84■□□□□ 0.13
HTR1BP28222 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.84■□□□□ 0.13
HTR1BP28222 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.84■□□□□ 0.13
HTR1BP28222 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.84■□□□□ 0.13
HTR1BP28222 AL109936.8-201ENST00000641772 604 ntBASIC15.84■□□□□ 0.13
HTR1BP28222 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 TSPY26P-202ENST00000565928 3884 ntBASIC15.84■□□□□ 0.13
HTR1BP28222 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HTR1BP28222 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
HTR1BP28222 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.84■□□□□ 0.13
HTR1BP28222 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTR1BP28222 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HTR1BP28222 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.83■□□□□ 0.13
HTR1BP28222 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms