Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
COL8A2P25067 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.42□□□□□ -0.26
COL8A2P25067 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
COL8A2P25067 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.42□□□□□ -0.26
COL8A2P25067 LINC01115-203ENST00000606068 577 ntBASIC13.42□□□□□ -0.26
COL8A2P25067 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.42□□□□□ -0.26
COL8A2P25067 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
COL8A2P25067 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
COL8A2P25067 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.42□□□□□ -0.26
COL8A2P25067 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
COL8A2P25067 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 Z97205.2-201ENST00000564697 1639 ntBASIC13.42□□□□□ -0.26
COL8A2P25067 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.42□□□□□ -0.26
COL8A2P25067 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 AP001282.1-201ENST00000531301 1499 ntBASIC13.42□□□□□ -0.26
COL8A2P25067 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
COL8A2P25067 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.41□□□□□ -0.26
COL8A2P25067 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.41□□□□□ -0.26
COL8A2P25067 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.41□□□□□ -0.26
COL8A2P25067 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 PHKG1P2-201ENST00000457537 863 ntBASIC13.41□□□□□ -0.26
COL8A2P25067 MEIS3P1-201ENST00000495167 958 ntBASIC13.41□□□□□ -0.26
COL8A2P25067 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.41□□□□□ -0.26
COL8A2P25067 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.41□□□□□ -0.26
COL8A2P25067 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.41□□□□□ -0.26
COL8A2P25067 AC092337.1-201ENST00000568699 1129 ntBASIC13.41□□□□□ -0.26
COL8A2P25067 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 AC008494.3-201ENST00000606615 944 ntBASIC13.41□□□□□ -0.26
COL8A2P25067 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL8A2P25067 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
COL8A2P25067 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.41□□□□□ -0.26
COL8A2P25067 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms