Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.08□□□□□ -0.16
MSR1P21757 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.07□□□□□ -0.16
MSR1P21757 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
MSR1P21757 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.07□□□□□ -0.16
MSR1P21757 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.07□□□□□ -0.16
MSR1P21757 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.07□□□□□ -0.16
MSR1P21757 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
MSR1P21757 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.07□□□□□ -0.16
MSR1P21757 CNN2P11-201ENST00000429351 262 ntBASIC14.07□□□□□ -0.16
MSR1P21757 GPS2P2-201ENST00000430745 888 ntBASIC14.07□□□□□ -0.16
MSR1P21757 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MSR1P21757 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.07□□□□□ -0.16
MSR1P21757 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.07□□□□□ -0.16
MSR1P21757 AC004967.1-201ENST00000453589 447 ntBASIC14.07□□□□□ -0.16
MSR1P21757 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.07□□□□□ -0.16
MSR1P21757 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.07□□□□□ -0.16
MSR1P21757 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.07□□□□□ -0.16
MSR1P21757 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.07□□□□□ -0.16
MSR1P21757 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MSR1P21757 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MSR1P21757 AC003101.2-201ENST00000612557 442 ntBASIC14.07□□□□□ -0.16
MSR1P21757 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.07□□□□□ -0.16
MSR1P21757 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MSR1P21757 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.07□□□□□ -0.16
MSR1P21757 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MSR1P21757 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MSR1P21757 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MSR1P21757 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MSR1P21757 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MSR1P21757 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MSR1P21757 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.06□□□□□ -0.16
MSR1P21757 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MSR1P21757 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.06□□□□□ -0.16
MSR1P21757 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.06□□□□□ -0.16
MSR1P21757 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.06□□□□□ -0.16
MSR1P21757 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MSR1P21757 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MSR1P21757 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.06□□□□□ -0.16
MSR1P21757 SPDYE14P-201ENST00000442619 822 ntBASIC14.06□□□□□ -0.16
MSR1P21757 EEF1DP4-201ENST00000446006 880 ntBASIC14.06□□□□□ -0.16
MSR1P21757 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.06□□□□□ -0.16
MSR1P21757 SNHG9-202ENST00000564014 471 ntBASIC14.06□□□□□ -0.16
MSR1P21757 AC026150.2-201ENST00000564693 1156 ntBASIC14.06□□□□□ -0.16
MSR1P21757 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 AC105021.1-202ENST00000570572 669 ntBASIC14.06□□□□□ -0.16
MSR1P21757 AL450472.2-201ENST00000603663 1156 ntBASIC14.06□□□□□ -0.16
MSR1P21757 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.06□□□□□ -0.16
MSR1P21757 AC134684.3-201ENST00000641758 218 ntBASIC14.06□□□□□ -0.16
MSR1P21757 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MSR1P21757 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 TSPY26P-202ENST00000565928 3884 ntBASIC14.06□□□□□ -0.16
MSR1P21757 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.06□□□□□ -0.16
MSR1P21757 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MSR1P21757 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MSR1P21757 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MSR1P21757 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.05□□□□□ -0.16
MSR1P21757 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MSR1P21757 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MSR1P21757 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MSR1P21757 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.05□□□□□ -0.16
MSR1P21757 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MSR1P21757 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.05□□□□□ -0.16
MSR1P21757 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
MSR1P21757 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MSR1P21757 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms