Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CTLA4P16410 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CTLA4P16410 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.11□□□□□ -0.15
CTLA4P16410 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.11□□□□□ -0.15
CTLA4P16410 AL353705.2-201ENST00000428243 662 ntBASIC14.11□□□□□ -0.15
CTLA4P16410 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.11□□□□□ -0.15
CTLA4P16410 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.11□□□□□ -0.15
CTLA4P16410 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.11□□□□□ -0.15
CTLA4P16410 BANF1P1-201ENST00000553684 263 ntBASIC14.11□□□□□ -0.15
CTLA4P16410 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.11□□□□□ -0.15
CTLA4P16410 AC006486.2-201ENST00000624246 2199 ntBASIC14.11□□□□□ -0.15
CTLA4P16410 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.11□□□□□ -0.15
CTLA4P16410 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CTLA4P16410 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CTLA4P16410 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CTLA4P16410 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CTLA4P16410 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CTLA4P16410 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CTLA4P16410 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTLA4P16410 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CTLA4P16410 AC127383.1-201ENST00000444697 1800 ntBASIC14.11□□□□□ -0.15
CTLA4P16410 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.1□□□□□ -0.15
CTLA4P16410 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.1□□□□□ -0.15
CTLA4P16410 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CTLA4P16410 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CTLA4P16410 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.1□□□□□ -0.15
CTLA4P16410 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CTLA4P16410 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 RPSAP43-201ENST00000402237 625 ntBASIC14.1□□□□□ -0.15
CTLA4P16410 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 BX842568.4-201ENST00000421222 227 ntBASIC14.1□□□□□ -0.15
CTLA4P16410 GPS2P2-201ENST00000430745 888 ntBASIC14.1□□□□□ -0.15
CTLA4P16410 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.1□□□□□ -0.15
CTLA4P16410 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 AC112482.1-201ENST00000492080 688 ntBASIC14.1□□□□□ -0.15
CTLA4P16410 AP000344.2-201ENST00000512987 629 ntBASIC14.1□□□□□ -0.15
CTLA4P16410 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 MIR3687-2-201ENST00000577708 61 ntBASIC14.1□□□□□ -0.15
CTLA4P16410 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.1□□□□□ -0.15
CTLA4P16410 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CTLA4P16410 AC018529.1-201ENST00000613063 361 ntBASIC14.1□□□□□ -0.15
CTLA4P16410 MIR3687-1-201ENST00000614492 61 ntBASIC14.1□□□□□ -0.15
CTLA4P16410 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.1□□□□□ -0.15
CTLA4P16410 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.1□□□□□ -0.15
CTLA4P16410 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CTLA4P16410 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTLA4P16410 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.09□□□□□ -0.15
CTLA4P16410 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CTLA4P16410 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.09□□□□□ -0.15
CTLA4P16410 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms