Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.4□□□□□ -0.1
FREM3P0C091 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.4□□□□□ -0.1
FREM3P0C091 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.4□□□□□ -0.1
FREM3P0C091 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
FREM3P0C091 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.4□□□□□ -0.1
FREM3P0C091 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
FREM3P0C091 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.4□□□□□ -0.1
FREM3P0C091 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
FREM3P0C091 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.4□□□□□ -0.1
FREM3P0C091 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.4□□□□□ -0.1
FREM3P0C091 AL596325.1-201ENST00000563991 1082 ntBASIC14.4□□□□□ -0.1
FREM3P0C091 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.4□□□□□ -0.1
FREM3P0C091 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.4□□□□□ -0.1
FREM3P0C091 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FREM3P0C091 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 AP002414.2-201ENST00000591780 3365 ntBASIC14.4□□□□□ -0.1
FREM3P0C091 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 AP001282.1-201ENST00000531301 1499 ntBASIC14.4□□□□□ -0.1
FREM3P0C091 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.4□□□□□ -0.1
FREM3P0C091 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.4□□□□□ -0.1
FREM3P0C091 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FREM3P0C091 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.4□□□□□ -0.1
FREM3P0C091 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.4□□□□□ -0.1
FREM3P0C091 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.39□□□□□ -0.11
FREM3P0C091 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.39□□□□□ -0.11
FREM3P0C091 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 AC004987.2-201ENST00000395959 1148 ntBASIC14.39□□□□□ -0.11
FREM3P0C091 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
FREM3P0C091 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.39□□□□□ -0.11
FREM3P0C091 ACA64.2-201ENST00000459014 129 ntBASIC14.39□□□□□ -0.11
FREM3P0C091 HNRNPUP1-201ENST00000554987 333 ntBASIC14.39□□□□□ -0.11
FREM3P0C091 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 AC243562.2-201ENST00000561247 970 ntBASIC14.39□□□□□ -0.11
FREM3P0C091 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.39□□□□□ -0.11
FREM3P0C091 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FREM3P0C091 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FREM3P0C091 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 SPDYE17-201ENST00000412399 783 ntBASIC14.39□□□□□ -0.11
FREM3P0C091 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.39□□□□□ -0.11
FREM3P0C091 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 SERBP1P3-201ENST00000459980 809 ntBASIC14.39□□□□□ -0.11
FREM3P0C091 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.39□□□□□ -0.11
FREM3P0C091 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.39□□□□□ -0.11
FREM3P0C091 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.39□□□□□ -0.11
FREM3P0C091 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.39□□□□□ -0.11
FREM3P0C091 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.39□□□□□ -0.11
FREM3P0C091 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FREM3P0C091 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FREM3P0C091 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.39□□□□□ -0.11
FREM3P0C091 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FREM3P0C091 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FREM3P0C091 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FREM3P0C091 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FREM3P0C091 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.38□□□□□ -0.11
FREM3P0C091 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FREM3P0C091 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FREM3P0C091 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FREM3P0C091 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FREM3P0C091 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
FREM3P0C091 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms