Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPN1P07384 AC104640.1-201ENST00000562617 2109 ntBASIC15.71■□□□□ 0.11
CAPN1P07384 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.71■□□□□ 0.1
CAPN1P07384 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CAPN1P07384 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CAPN1P07384 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.1
CAPN1P07384 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CAPN1P07384 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CAPN1P07384 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
CAPN1P07384 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 CNN2P2-201ENST00000443536 909 ntBASIC15.7■□□□□ 0.1
CAPN1P07384 CNN2P3-201ENST00000450201 906 ntBASIC15.7■□□□□ 0.1
CAPN1P07384 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 PRYP6-201ENST00000514804 343 ntBASIC15.7■□□□□ 0.1
CAPN1P07384 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPN1P07384 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 AL136317.3-201ENST00000618497 906 ntBASIC15.7■□□□□ 0.1
CAPN1P07384 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.7■□□□□ 0.1
CAPN1P07384 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CAPN1P07384 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CAPN1P07384 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPN1P07384 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPN1P07384 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPN1P07384 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 AC126177.1-201ENST00000547829 2218 ntBASIC15.7■□□□□ 0.1
CAPN1P07384 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN1P07384 TUBB3P1-201ENST00000405796 1332 ntBASIC15.69■□□□□ 0.1
CAPN1P07384 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 AC245100.5-201ENST00000452108 331 ntBASIC15.69■□□□□ 0.1
CAPN1P07384 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.69■□□□□ 0.1
CAPN1P07384 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.69■□□□□ 0.1
CAPN1P07384 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CAPN1P07384 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 AC073347.1-201ENST00000421633 2643 ntBASIC15.69■□□□□ 0.1
CAPN1P07384 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CAPN1P07384 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN1P07384 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN1P07384 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms