Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
S1PR4O95977 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.77■□□□□ 0.12
S1PR4O95977 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.77■□□□□ 0.12
S1PR4O95977 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.77■□□□□ 0.12
S1PR4O95977 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
S1PR4O95977 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
S1PR4O95977 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
S1PR4O95977 AL139400.1-201ENST00000366220 510 ntBASIC15.77■□□□□ 0.12
S1PR4O95977 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
S1PR4O95977 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
S1PR4O95977 AC136604.1-201ENST00000418535 575 ntBASIC15.77■□□□□ 0.12
S1PR4O95977 SPDYE7P-202ENST00000420373 878 ntBASIC15.77■□□□□ 0.12
S1PR4O95977 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.77■□□□□ 0.12
S1PR4O95977 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.77■□□□□ 0.12
S1PR4O95977 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
S1PR4O95977 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
S1PR4O95977 AC004449.1-201ENST00000564240 433 ntBASIC15.77■□□□□ 0.12
S1PR4O95977 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
S1PR4O95977 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.77■□□□□ 0.12
S1PR4O95977 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
S1PR4O95977 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
S1PR4O95977 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
S1PR4O95977 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
S1PR4O95977 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.77■□□□□ 0.11
S1PR4O95977 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
S1PR4O95977 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
S1PR4O95977 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.77■□□□□ 0.11
S1PR4O95977 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.77■□□□□ 0.11
S1PR4O95977 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
S1PR4O95977 AC112693.3-201ENST00000624819 1983 ntBASIC15.76■□□□□ 0.11
S1PR4O95977 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 AL035456.1-201ENST00000456064 1369 ntBASIC15.76■□□□□ 0.11
S1PR4O95977 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 AL109954.1-202ENST00000564051 2148 ntBASIC15.76■□□□□ 0.11
S1PR4O95977 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 AL607033.1-201ENST00000623900 1599 ntBASIC15.76■□□□□ 0.11
S1PR4O95977 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
S1PR4O95977 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.76■□□□□ 0.11
S1PR4O95977 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 FO393414.2-201ENST00000405153 598 ntBASIC15.76■□□□□ 0.11
S1PR4O95977 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.76■□□□□ 0.11
S1PR4O95977 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.76■□□□□ 0.11
S1PR4O95977 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.76■□□□□ 0.11
S1PR4O95977 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC15.76■□□□□ 0.11
S1PR4O95977 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.76■□□□□ 0.11
S1PR4O95977 MIR3908-201ENST00000579798 126 ntBASIC15.76■□□□□ 0.11
S1PR4O95977 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.76■□□□□ 0.11
S1PR4O95977 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.76■□□□□ 0.11
S1PR4O95977 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 AC006486.2-201ENST00000624246 2199 ntBASIC15.76■□□□□ 0.11
S1PR4O95977 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
S1PR4O95977 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
S1PR4O95977 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
S1PR4O95977 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR4O95977 KRT8P12-202ENST00000472924 1397 ntBASIC15.75■□□□□ 0.11
S1PR4O95977 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR4O95977 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR4O95977 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.75■□□□□ 0.11
S1PR4O95977 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR4O95977 DBET-201ENST00000630918 3363 ntBASIC15.75■□□□□ 0.11
S1PR4O95977 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.75■□□□□ 0.11
S1PR4O95977 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR4O95977 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR4O95977 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR4O95977 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
S1PR4O95977 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR4O95977 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms