Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC023024.2-201ENST00000623561 1993 ntBASIC13.36□□□□□ -0.27
SIX6O95475 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SIX6O95475 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.35□□□□□ -0.27
SIX6O95475 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.35□□□□□ -0.27
SIX6O95475 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.35□□□□□ -0.27
SIX6O95475 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 AC005562.1-201ENST00000583030 3219 ntBASIC13.35□□□□□ -0.27
SIX6O95475 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SIX6O95475 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.35□□□□□ -0.27
SIX6O95475 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SIX6O95475 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SIX6O95475 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.35□□□□□ -0.27
SIX6O95475 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.35□□□□□ -0.27
SIX6O95475 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.35□□□□□ -0.27
SIX6O95475 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.35□□□□□ -0.27
SIX6O95475 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.35□□□□□ -0.27
SIX6O95475 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.35□□□□□ -0.27
SIX6O95475 NCF1C-201ENST00000438382 1427 ntBASIC13.35□□□□□ -0.27
SIX6O95475 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 TP73-AS1-210ENST00000637775 1455 ntBASIC13.35□□□□□ -0.27
SIX6O95475 BX640514.1-201ENST00000583223 1918 ntBASIC13.35□□□□□ -0.27
SIX6O95475 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
SIX6O95475 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SIX6O95475 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SIX6O95475 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.34□□□□□ -0.27
SIX6O95475 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SIX6O95475 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SIX6O95475 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.34□□□□□ -0.27
SIX6O95475 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.34□□□□□ -0.27
SIX6O95475 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.34□□□□□ -0.27
SIX6O95475 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.34□□□□□ -0.27
SIX6O95475 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.34□□□□□ -0.27
SIX6O95475 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.34□□□□□ -0.27
SIX6O95475 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SIX6O95475 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.34□□□□□ -0.27
SIX6O95475 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.34□□□□□ -0.27
SIX6O95475 TSPY22P-201ENST00000427496 604 ntBASIC13.34□□□□□ -0.27
SIX6O95475 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.34□□□□□ -0.27
SIX6O95475 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.34□□□□□ -0.27
SIX6O95475 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.34□□□□□ -0.27
SIX6O95475 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.34□□□□□ -0.27
SIX6O95475 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.34□□□□□ -0.27
SIX6O95475 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.34□□□□□ -0.27
SIX6O95475 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 674.9 ms