Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC23.29■■□□□ 1.32
RAPGEF3O95398 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC23.29■■□□□ 1.32
RAPGEF3O95398 MIR4783-201ENST00000580343 82 ntBASIC23.29■■□□□ 1.32
RAPGEF3O95398 RPS15-205ENST00000586686 562 ntTSL 5 BASIC23.29■■□□□ 1.32
RAPGEF3O95398 RPS15-208ENST00000591804 711 ntTSL 5 BASIC23.29■■□□□ 1.32
RAPGEF3O95398 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF3O95398 MIR6842-201ENST00000612539 65 ntBASIC23.29■■□□□ 1.32
RAPGEF3O95398 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC23.29■■□□□ 1.32
RAPGEF3O95398 MVK-214ENST00000629016 1591 ntTSL 5 BASIC23.29■■□□□ 1.32
RAPGEF3O95398 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF3O95398 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF3O95398 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF3O95398 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RAPGEF3O95398 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RAPGEF3O95398 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.29■■□□□ 1.32
RAPGEF3O95398 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF3O95398 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF3O95398 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF3O95398 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF3O95398 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF3O95398 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 ISCA2P1-201ENST00000425548 448 ntBASIC23.28■■□□□ 1.32
RAPGEF3O95398 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 NEU3-205ENST00000531619 582 ntTSL 5 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF3O95398 RN7SL163P-201ENST00000583100 276 ntBASIC23.28■■□□□ 1.32
RAPGEF3O95398 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF3O95398 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF3O95398 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RAPGEF3O95398 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF3O95398 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RAPGEF3O95398 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF3O95398 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RAPGEF3O95398 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF3O95398 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF3O95398 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF3O95398 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC23.27■■□□□ 1.32
RAPGEF3O95398 AC141586.1-203ENST00000567242 366 ntBASIC23.27■■□□□ 1.32
RAPGEF3O95398 PCBP2-OT1-201ENST00000634357 590 ntBASIC23.27■■□□□ 1.32
RAPGEF3O95398 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RAPGEF3O95398 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF3O95398 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF3O95398 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.27■■□□□ 1.32
RAPGEF3O95398 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
RAPGEF3O95398 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
RAPGEF3O95398 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
RAPGEF3O95398 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF3O95398 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF3O95398 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF3O95398 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 AL353637.1-201ENST00000451571 732 ntBASIC23.26■■□□□ 1.31
RAPGEF3O95398 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF3O95398 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF3O95398 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC23.26■■□□□ 1.31
RAPGEF3O95398 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF3O95398 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC23.25■■□□□ 1.31
RAPGEF3O95398 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF3O95398 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF3O95398 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC23.24■■□□□ 1.31
RAPGEF3O95398 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms